BamFileViews | Views into a set of BAM files |
BamFileViews-class | Views into a set of BAM files |
BamFileViews-method | Views into a set of BAM files |
BigWigFileViews | Views into a set of BigWig files |
BigWigFileViews-class | Views into a set of BigWig files |
BigWigFileViews-method | Views into a set of BigWig files |
class:GenomicFileViews | Views into a set of files |
countBam-method | Views into a set of BAM files |
coverage-method | Views into a set of BigWig files |
dim-method | Views into a set of files |
dimnames-method | Views into a set of files |
dimnames<--method | Views into a set of files |
FaFileViews | Views into a set of Fasta files |
FaFileViews-class | Views into a set of Fasta files |
FaFileViews-method | Views into a set of Fasta files |
fileExperiment | Views into a set of files |
fileExperiment<- | Views into a set of files |
fileList | Views into a set of files |
fileList<- | Views into a set of files |
fileRange | Views into a set of files |
fileRange<- | Views into a set of files |
fileSample | Views into a set of files |
fileSample<- | Views into a set of files |
findTypeRegistry | Functions for creating and searching a registry of file types. |
GenomicFileViews | Views into a set of files |
GenomicFileViews-class | Views into a set of files |
makeFileType | Functions for creating and searching a registry of file types. |
names-method | Views into a set of files |
names<--method | Views into a set of files |
reduceBy | Distribute parallel computations across files |
reduceByFile | Distribute parallel computations across files |
reduceByFile-method | Distribute parallel computations across files |
reduceByRange | Distribute parallel computations across files |
reduceByRange-method | Distribute parallel computations across files |
registerFileType | Functions for creating and searching a registry of file types. |
registry-utils | Functions for creating and searching a registry of file types. |
scanBam-method | Views into a set of BAM files |
show-method | Views into a set of files |
summarizeOverlaps-method | Views into a set of BAM files |
summary-method | Views into a set of BigWig files |
yieldSize-method | Views into a set of files |
yieldSize<--method | Views into a set of files |
[-method | Views into a set of files |