source("http://bioconductor.org/biocLite.R")
biocLite("simpIntLists")

simpIntLists

The package contains BioGRID interactions for various organisms in a simple format

Bioconductor version: 2.13

The package contains BioGRID interactions for arabidopsis(thale cress), c.elegans, fruit fly, human, mouse, yeast( budding yeast ) and S.pombe (fission yeast) . Entrez ids, official names and unique ids can be used to find proteins. The format of interactions are lists. For each gene/protein, there is an entry in the list with "name" containing name of the gene/protein and "interactors" containing the list of genes/proteins interacting with it.

Author: Kircicegi Korkmaz, Volkan Atalay, Rengul Cetin-Atalay

Maintainer: Kircicegi Korkmaz <e102771 at ceng.metu.edu.tr>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("simpIntLists")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("simpIntLists")

 

PDF	R Script	simpIntLists
PDF		Reference Manual

Details

biocViews	ExperimentData
Version	0.99.6
License	GPL (>= 2)
Depends
Imports
Suggests
System Requirements
URL
Depends On Me	ibh
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	simpIntLists_0.99.6.tar.gz
Windows Binary	simpIntLists_0.99.6.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	simpIntLists_0.99.6.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats