source("http://bioconductor.org/biocLite.R")
biocLite("davidTiling")

davidTiling

Data and analysis scripts for David, Huber et al. yeast tiling array paper

Bioconductor version: 2.13

This package contains the data for the paper by L. David et al. in PNAS 2006 (PMID 16569694): 8 CEL files of Affymetrix genechips, an ExpressionSet object with the raw feature data, a probe annotation data structure for the chip and the yeast genome annotation (GFF file) that was used. In addition, some custom-written analysis functions are provided, as well as R scripts in the scripts directory.

Author: Wolfgang Huber <huber at ebi.ac.uk>, Joern Toedling <toedling at ebi.ac.uk>

Maintainer: Wolfgang Huber <huber at ebi.ac.uk>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("davidTiling")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("davidTiling")

 

PDF		Reference Manual

Details

biocViews	ExperimentData, Yeast
Version	1.2.19
License	LGPL
Depends	R (>= 2.10), Biobase(>= 2.5.5), tilingArray, GO.db
Imports
Suggests
System Requirements
URL	http://www.ebi.ac.uk/huber
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	davidTiling_1.2.19.tar.gz
Windows Binary	davidTiling_1.2.19.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	davidTiling_1.2.19.tgz
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