source("http://bioconductor.org/biocLite.R")
biocLite("KEGGdzPathwaysGEO")

KEGGdzPathwaysGEO

KEGG Disease Datasets from GEO

Bioconductor version: 2.13

This is a collection of 24 data sets for which the phenotype is a disease with a corresponding pathway in the KEGG database.This collection of datasets were used as gold standard in comparing gene set analysis methods by the PADOG package.

Author: Gaurav Bhatti, Adi L. Tarca

Maintainer: Gaurav Bhatti <gbhatti at med.wayne.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("KEGGdzPathwaysGEO")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("KEGGdzPathwaysGEO")

 

PDF		Reference Manual

Details

biocViews	ExperimentData
Version	1.1.3
License	GPL-2
Depends	R (>= 2.13.0)
Imports	Biobase, BiocGenerics
Suggests
System Requirements
URL
Depends On Me	PADOG
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	KEGGdzPathwaysGEO_1.1.3.tar.gz
Windows Binary	KEGGdzPathwaysGEO_1.1.3.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	KEGGdzPathwaysGEO_1.1.3.tgz
Browse/checkout source	(username/password: readonly)
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