source("http://bioconductor.org/biocLite.R")
biocLite("waveTiling")

waveTiling

Wavelet-Based Models for Tiling Array Transcriptome Analysis

Bioconductor version: 2.13

This package is designed to conduct transcriptome analysis for tiling arrays based on fast wavelet-based functional models.

Author: Kristof De Beuf <kristof.debeuf at UGent.be>, Peter Pipelers <peter.pipelers at ugent.be> and Lieven Clement <lieven.clement at gmail.com>

Maintainer: Kristof De Beuf <kristof.debeuf at UGent.be>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("waveTiling")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("waveTiling")

 

PDF	R Script	The waveTiling package
PDF		Reference Manual
Text		NEWS

Details

biocViews	DifferentialExpression, GeneExpression, MicroArray, Software, TimeCourse
Version	1.4.0
In Bioconductor since	BioC 2.11 (R-2.15)
License	GPL (>=2)
Depends	oligo, oligoClasses, Biobase, Biostrings, GenomeGraphs
Imports	methods, affy, preprocessCore, GenomicRanges, waveslim, IRanges
Suggests	BSgenome, BSgenome.Athaliana.TAIR.TAIR9, waveTilingData, pd.atdschip.tiling, TxDb.Athaliana.BioMart.plantsmart12
System Requirements
URL	https://r-forge.r-project.org/projects/wavetiling/
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	waveTiling_1.4.0.tar.gz
Windows Binary	waveTiling_1.4.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	waveTiling_1.4.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats