source("http://bioconductor.org/biocLite.R")
biocLite("prada")

prada

Data analysis for cell-based functional assays

Bioconductor version: 2.13

Tools for analysing and navigating data from high-throughput phenotyping experiments based on cellular assays and fluorescent detection (flow cytometry (FACS), high-content screening microscopy).

Author: Florian Hahne <florian.hahne at novartis.com>, Wolfgang Huber <huber at ebi.ac.uk>, Markus Ruschhaupt, Joern Toedling <toedling at ebi.ac.uk>, Joseph Barry <joseph.barry at embl.de>

Maintainer: Florian Hahne <florian.hahne at novartis.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("prada")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("prada")

 

PDF	R Script	Combining prada output and cellHTS
PDF	R Script	Removal of contaminants from FACS data
PDF		Reference Manual

Details

biocViews	CellBasedAssays, Software, Visualization
Version	1.38.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier
License	LGPL
Depends	R (>= 2.10), Biobase, RColorBrewer, grid, methods, rrcov
Imports	Biobase, BiocGenerics, graphics, grDevices, grid, MASS, methods, RColorBrewer, rrcov, stats4, utils
Suggests	cellHTS, tcltk
System Requirements
URL
Depends On Me	cellHTS, domainsignatures, facsDorit, RNAither
Imports Me	cellHTS2
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	prada_1.38.0.tar.gz
Windows Binary	prada_1.38.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	prada_1.38.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats