source("http://bioconductor.org/biocLite.R")
biocLite("nucleR")

nucleR

Nucleosome positioning package for R

Bioconductor version: 2.13

Nucleosome positioning for Tiling Arrays and Next Generation Sequencing Experiments

Author: Oscar Flores, David Rossell

Maintainer: Oscar Flores <oflores at mmb.pcb.ub.es>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("nucleR")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("nucleR")

 

PDF	R Script	Quick analysis of nucleosome positioning experiments
PDF		Reference Manual
Text		NEWS

Details

biocViews	ChIPseq, Genetics, HighThroughputSequencing, Microarray, Sequencing, Software
Version	1.10.0
In Bioconductor since	BioC 2.9 (R-2.14)
License	LGPL (>= 3)
Depends	methods, BiocGenerics(>= 0.1.0), IRanges(>= 1.13.5), Biobase(>= 2.15.1), ShortRead, parallel
Imports	methods, BiocGenerics, IRanges, Biobase, ShortRead, GenomicRanges, stats
Suggests
System Requirements
URL
Depends On Me
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	nucleR_1.10.0.tar.gz
Windows Binary	nucleR_1.10.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	nucleR_1.10.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats