source("http://bioconductor.org/biocLite.R")
biocLite("makecdfenv")

makecdfenv

CDF Environment Maker

Bioconductor version: 2.13

This package has two functions. One reads a Affymetrix chip description file (CDF) and creates a hash table environment containing the location/probe set membership mapping. The other creates a package that automatically loads that environment.

Author: Rafael A. Irizarry <rafa at jhu.edu>, Laurent Gautier <laurent at cbs.dtu.dk>, Wolfgang Huber <w.huber at dkfz-heidelberg.de>, Ben Bolstad <bmb at bmbolstad.com>

Maintainer: James W. MacDonald <jmacdon at u.washington.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("makecdfenv")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("makecdfenv")

 

PDF	R Script	makecdfenv primer
PDF		Reference Manual

Details

biocViews	DataImport, OneChannel, Preprocessing, Software
Version	1.38.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier
License	GPL (>= 2)
Depends	R (>= 2.6.0), methods, affyio
Imports	Biobase, affy, methods, stats, utils, zlibbioc
Suggests
System Requirements
URL
Depends On Me	altcdfenvs
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	makecdfenv_1.38.0.tar.gz
Windows Binary	makecdfenv_1.38.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	makecdfenv_1.38.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats