source("http://bioconductor.org/biocLite.R")
biocLite("genomeIntervals")

genomeIntervals

Operations on genomic intervals

Bioconductor version: 2.13

This package defines classes for representing genomic intervals and provides functions and methods for working with these. Note: The package provides the basic infrastructure for and is enhanced by the package 'girafe'.

Author: Julien Gagneur <gagneur at genzentrum.lmu.de>, Joern Toedling, Richard Bourgon, Nicolas Delhomme

Maintainer: Julien Gagneur <gagneur at genzentrum.lmu.de>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("genomeIntervals")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("genomeIntervals")

 

PDF	R Script	Overview of the genomeIntervals package.
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataImport, Genetics, Infrastructure, Software
Version	1.18.0
In Bioconductor since	BioC 2.4 (R-2.9)
License	Artistic-2.0
Depends	R (>= 2.15.0), methods, intervals (>= 0.14.0), BiocGenerics(>= 0.3.2)
Imports	methods, Biobase
Suggests
System Requirements
URL
Depends On Me	easyRNASeq, girafe
Imports Me
Suggests Me	RnaSeqTutorial

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	genomeIntervals_1.18.0.tar.gz
Windows Binary	genomeIntervals_1.18.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	genomeIntervals_1.18.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats