source("http://bioconductor.org/biocLite.R")
biocLite("SigFuge")

SigFuge

SigFuge

Bioconductor version: 2.13

Algorithm for testing significance of clustering in RNA-seq data.

Author: Patrick Kimes, Christopher Cabanski

Maintainer: Patrick Kimes <pkimes at live.unc.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SigFuge")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SigFuge")

 

PDF	R Script	SigFuge Tutorial
PDF		Reference Manual

Details

biocViews	Clustering, RNAseq, Software, Visualization
Version	1.0.2
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-3
Depends	R (>= 3.0.2), GenomicRanges
Imports	ggplot2, matlab, reshape, sigclust
Suggests	org.Hs.eg.db, prebsdata, Rsamtools, TxDb.Hsapiens.UCSC.hg19.knownGene, BiocStyle
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	SigFuge_1.0.2.tar.gz
Windows Binary	SigFuge_1.0.2.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	SigFuge_1.0.2.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats