source("http://bioconductor.org/biocLite.R")
biocLite("RMAPPER")

RMAPPER

R interface to the MAPPER database of transcription factor binding sites

Bioconductor version: 2.13

The RMAPPER package allows you to retrieve a set of predicted transcription factor binding sites from the MAPPER database (http://genome.ufl.edu/mapper/) through a simple HTTP request.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: Heike Sichtig <hsichtig at ufl.edu>, Alberto Riva <ariva at ufl.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RMAPPER")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RMAPPER")

 

PDF	R Script	Interface to MAPPER TFBS database
PDF		Reference Manual

Details

biocViews	Annotation, Genetics, Software
Version	1.12.0
In Bioconductor since	BioC 1.8 (R-2.3)
License	Artistic 2.0
Depends	methods
Imports
Suggests	RCurl
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	RMAPPER_1.12.0.tar.gz
Windows Binary	RMAPPER_1.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	RMAPPER_1.12.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats