source("http://bioconductor.org/biocLite.R")
biocLite("NTW")

NTW

Predict gene network using an Ordinary Differential Equation (ODE) based method

Bioconductor version: 2.13

This package predicts the gene-gene interaction network and identifies the direct transcriptional targets of the perturbation using an ODE (Ordinary Differential Equation) based method.

Author: Wei Xiao, Yin Jin, Darong Lai, Xinyi Yang, Yuanhua Liu, Christine Nardini

Maintainer: Yuanhua Liu <liuyuanhua at picb.ac.cn>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("NTW")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("NTW")

 

PDF	R Script	NTW vignette
PDF		Reference Manual
Text		NEWS

Details

biocViews	Preprocessing, Software
Version	1.12.0
In Bioconductor since	BioC 2.7 (R-2.12)
License	GPL-2
Depends	R (>= 2.3.0)
Imports	mvtnorm, stats, utils
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System Requirements
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	NTW_1.12.0.tar.gz
Windows Binary	NTW_1.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	NTW_1.12.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats