source("http://bioconductor.org/biocLite.R")
biocLite("DEGseq")

DEGseq

Identify Differentially Expressed Genes from RNA-seq data

Bioconductor version: 2.13

DEGseq is an R package to identify differentially expressed genes from RNA-Seq data.

Author: Likun Wang <wanglikun at tsinghua.edu.cn> and Xi Wang <wang-xi05 at mails.tsinghua.edu.cn>.

Maintainer: Likun Wang <wanglikun at tsinghua.edu.cn>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("DEGseq")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DEGseq")

 

PDF	R Script	DEGseq
PDF		Reference Manual
Text		NEWS

Details

biocViews	DifferentialExpression, GeneExpression, Preprocessing, RNAseq, Software
Version	1.16.0
In Bioconductor since	BioC 2.5 (R-2.10)
License	LGPL (>=2)
Depends	R (>= 2.8.0), qvalue, samr, methods
Imports	graphics, grDevices, methods, stats, utils
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	DEGseq_1.16.0.tar.gz
Windows Binary	DEGseq_1.16.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	DEGseq_1.16.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats