source("http://bioconductor.org/biocLite.R")
biocLite("CMA")

CMA

Synthesis of microarray-based classification

Bioconductor version: 2.13

This package provides a comprehensive collection of various microarray-based classification algorithms both from Machine Learning and Statistics. Variable Selection, Hyperparameter tuning, Evaluation and Comparison can be performed combined or stepwise in a user-friendly environment.

Author: Martin Slawski <ms at cs.uni-sb.de>, Anne-Laure Boulesteix <boulesteix at ibe.med.uni-muenchen.de>, Christoph Bernau <bernau at ibe.med.uni-muenchen.de>.

Maintainer: Christoph Bernau <bernau at ibe.med.uni-muenchen.de>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CMA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CMA")

 

PDF	R Script	CMA_vignette.pdf
PDF		Reference Manual

Details

biocViews	Classification, Software
Version	1.20.0
In Bioconductor since	BioC 2.3 (R-2.8)
License	GPL (>= 2)
Depends	R (>= 2.10), methods, stats, Biobase
Imports
Suggests	MASS, class, nnet, glmnet, e1071, randomForest, plsgenomics, gbm, mgcv, corpcor, limma, st, mvtnorm
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	CMA_1.20.0.tar.gz
Windows Binary	CMA_1.20.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	CMA_1.20.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats