source("http://bioconductor.org/biocLite.R")
biocLite("BayesPeak")

BayesPeak

Bayesian Analysis of ChIP-seq Data

Bioconductor version: 2.13

This package is an implementation of the BayesPeak algorithm for peak-calling in ChIP-seq data.

Author: Christiana Spyrou, Jonathan Cairns, Rory Stark, Andy Lynch, Simon Tavar\\'{e},

Maintainer: Jonathan Cairns <jmc200 at cam.ac.uk>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BayesPeak")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BayesPeak")

 

PDF	R Script	BayesPeak Vignette
PDF		regionOFdiag.pdf
PDF		Reference Manual

Details

biocViews	ChIPseq, Software
Version	1.14.0
In Bioconductor since	BioC 2.6 (R-2.11)
License	GPL (>= 2)
Depends	R (>= 2.14), IRanges
Imports	IRanges, graphics
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	BayesPeak_1.14.0.tar.gz
Windows Binary	BayesPeak_1.14.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	BayesPeak_1.14.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats