virtualArray

Build virtual array from different microarray platforms

Bioconductor version: Release (2.12)

This package permits the user to combine raw data of different microarray platforms into one virtual array. It consists of several functions that act subsequently in a semi-automatic way. Doing as much of the data combination and letting the user concentrate on analysing the resulting virtual array.

Author: Andreas Heider

Maintainer: Andreas Heider <aheider at trm.uni-leipzig.de>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("virtualArray")

To cite this package in a publication, start R and enter:

    citation("virtualArray")

Documentation

PDF	R Script	virtualArray Vignette
PDF		virtualArray-016.pdf
PDF		Reference Manual

Details

biocViews	Bioinformatics, DataImport, Microarray, MultipleComparisons, OneChannel, Preprocessing, Software
Version	1.4.1
In Bioconductor since	BioC 2.10 (R-2.15)
License	GPL-3
Depends	R (>= 2.15.0), BiocGenerics, methods, plyr, preprocessCore
Imports	affy, affyPLM, AnnotationDbi, Biobase, gcrma, GEOquery, graphics, methods, reshape2, stats, utils, tseries, outliers
Suggests	affydata, plier, limma, lumi, org.Hs.eg.db
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source	virtualArray_1.4.1.tar.gz
Windows Binary	virtualArray_1.4.1.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	virtualArray_1.4.1.tgz
Package Downloads Report	Download Stats

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