eiR
Accelerated similarity searching of small molecules
Bioconductor version: Release (2.12)
The eiR package provides utilities for accelerated structure similarity searching of very large small molecule data sets using an embedding and indexing approach.
Author: Kevin Horan
Maintainer: Kevin Horan <khoran at cs.ucr.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("eiR")
To cite this package in a publication, start R and enter:
citation("eiR")
Documentation
| R Script | eiR | |
| Reference Manual | ||
| Text | README | |
| Text | NEWS | |
| Text | LICENSE |
Details
| biocViews | Bioinformatics, Clustering, DataImport, Infrastructure, Proteomics, Software |
| Version | 1.0.3 |
| In Bioconductor since | BioC 2.13 (R-2.18) |
| License | Artistic-2.0 |
| Depends | R (>= 2.10.0), ChemmineR(>= 2.11.18), methods |
| Imports | snow, tools, snowfall, RUnit, methods, ChemmineR, RCurl, digest, BiocGenerics |
| Suggests | RCurl, snow |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | eiR_1.0.3.tar.gz |
| Windows Binary | |
| Mac OS X 10.6 (Snow Leopard) | eiR_1.0.3.tgz |
| Package Downloads Report | Download Stats |
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