PICS
Probabilistic inference of ChIP-seq
Bioconductor version: Release (2.12)
Probabilistic inference of ChIP-Seq using an empirical Bayes mixture model approach.
Author: Xuekui Zhang <xzhang at stat.ubc.ca>, Raphael Gottardo <rgottard at fhcrc.org>
Maintainer: Renan Sauteraud <rsautera at fhcrc.org>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("PICS")
To cite this package in a publication, start R and enter:
citation("PICS")
Documentation
| R Script | The PICS users guide | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | ChIPseq, Clustering, Sequencing, Software, Visualization |
| Version | 2.4.1 |
| In Bioconductor since | BioC 2.6 (R-2.11) |
| License | Artistic-2.0 |
| Depends | R (>= 2.14.0), BiocGenerics(>= 0.1.3) |
| Imports | methods, stats4, IRanges, GenomicRanges, graphics, grDevices, stats, Rsamtools |
| Suggests | ShortRead, rtracklayer, parallel |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | PING |
| Suggests Me |
Package Downloads
| Package Source | PICS_2.4.1.tar.gz |
| Windows Binary | PICS_2.4.1.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | PICS_2.4.1.tgz |
| Package Downloads Report | Download Stats |
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