ARRmNormalization

Adaptive Robust Regression normalization for Illumina methylation data

Bioconductor version: Release (2.12)

Perform the Adaptive Robust Regression method (ARRm) for the normalization of methylation data from the Illumina Infinium HumanMethylation 450k assay.

Author: Jean-Philippe Fortin, Celia M.T. Greenwood, Aurelie Labbe.

Maintainer: Jean-Philippe Fortin <jfortin at jhsph.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("ARRmNormalization")

To cite this package in a publication, start R and enter:

    citation("ARRmNormalization")

Documentation

PDF	R Script	ARRmNormalization
PDF		Reference Manual

Details

biocViews	DNAMethylation, Microarray, Preprocessing, Software, TwoChannel
Version	1.0.0
In Bioconductor since	BioC 2.13 (R-2.18)
License	Artistic-2.0
Depends	R (>= 2.15.1), ARRmData
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source	ARRmNormalization_1.0.0.tar.gz
Windows Binary	ARRmNormalization_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	ARRmNormalization_1.0.0.tgz
Package Downloads Report	Download Stats

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