Bioconductor version: Release (2.11)
Data sets needed for FunciSNP to integrate information from GWAS, 1000genomes and chromatin feature, in order to identify functional SNP in coding or non-coding regions.
Author: Simon G. Coetzee <simon at simoncoetzee.com> and Houtan Noushmehr, PhD <houtan at usp.br>
Maintainer: Simon G. Coetzee <scoetzee at gmail.com>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("FunciSNP.data")
To cite this package in a publication, start R and enter:
citation("FunciSNP.data")
| R Script | FunciSNP Vignette | |
| Reference Manual | ||
| Text | NEWS |
| biocViews | Annotation, DataImport, DataRepresentation, ExperimentData, Infrastructure, SequenceMatching |
| Version | 0.99.1 |
| License | GPL-3 |
| Depends | R (>= 2.14.0) |
| Imports | rtracklayer |
| Suggests | |
| System Requirements | |
| URL | http://coetzeeseq.usc.edu/publication/Coetzee_SG_et_al_2012/ |
| Depends On Me | FunciSNP |
| Imports Me | |
| Suggests Me |
| Package Source | FunciSNP.data_0.99.1.tar.gz |
| Windows Binary | FunciSNP.data_0.99.1.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) | FunciSNP.data_0.99.1.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!