nudge
Normal Uniform Differential Gene Expression detection
Bioconductor version: Release (2.11)
Package for normalizing microarray data in single and multiple replicate experiments and fitting a normal-uniform mixture to detect differentially expressed genes in the cases where the two samples are being compared directly or indirectly (via a common reference sample)
Author: N. Dean <nemad at stat.washington.edu> and A. E. Raftery <raftery at stat.washington.edu>
Maintainer: N. Dean <nemad at stat.washington.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("nudge")
To cite this package in a publication, start R and enter:
citation("nudge")
Documentation
| R Script | nudge Overview | |
| nvignplot1.pdf | ||
| nvignplot2.pdf | ||
| nvignplot3.pdf | ||
| nvignplot4.pdf | ||
| Reference Manual |
Details
| biocViews | DifferentialExpression, Microarray, Software, TwoChannel |
| Version | 1.24.0 |
| In Bioconductor since | BioC 1.8 (R-2.3) |
| License | GPL-2 |
| Depends | |
| Imports | stats |
| Suggests | |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | nudge_1.24.0.tar.gz |
| Windows Binary | nudge_1.24.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) | nudge_1.24.0.tgz |
| Package Downloads Report | Download Stats |
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