Bioconductor version: Release (2.11)
Non-parametric method for identifying differentially expressed (up- or down- regulated) genes based on the estimated percentage of false predictions (pfp). The method can combine data sets from different origins (meta-analysis) to increase the power of the identification.
Author: Fangxin Hong <fxhong at jimmy.harvard.edu> and Ben Wittner <Wittner.Ben at mgh.harvard.edu> with contribution from Rainer Breitling <r.breitling at bio.gla.ac.uk>, Colin Smith <colin at colinsmith.org>, and Florian Battke <battke at informatik.uni-tuebingen.de>
Maintainer: Fangxin Hong <fxhong at jimmy.harvard.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("RankProd")
To cite this package in a publication, start R and enter:
citation("RankProd")
| R Script | RankProd Tutorial | |
| Reference Manual | ||
| Text | LICENSE |
| biocViews | DifferentialExpression, Software |
| Version | 2.30.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier |
| License | file LICENSE |
| Depends | R (>= 1.9.0) |
| Imports | graphics |
| Suggests | |
| System Requirements | |
| URL | |
| Depends On Me | RNAither |
| Imports Me | HTSanalyzeR |
| Suggests Me | oneChannelGUI |
| Package Source | RankProd_2.30.0.tar.gz |
| Windows Binary | RankProd_2.30.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) | RankProd_2.30.0.tgz |
| Package Downloads Report | Download Stats |
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