Bioconductor version: Release (2.11)
Denoising Algorithm based on Relevance network Topology (DART) is an algorithm designed to evaluate the consistency of prior information molecular signatures (e.g in-vitro perturbation expression signatures) in independent molecular data (e.g gene expression data sets). If consistent, a pruning network strategy is then used to infer the activation status of the molecular signature in individual samples.
Author: Yan Jiao, Katherine Lawler, Andrew E Teschendorff
Maintainer: Katherine Lawler <katherine.lawler at kcl.ac.uk>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("DART")
To cite this package in a publication, start R and enter:
citation("DART")
| R Script | DART Tutorial | |
| Reference Manual | ||
| Text | NEWS |
| biocViews | Bioinformatics, DifferentialExpression, GeneExpression, GraphsAndNetworks, Pathways, Software |
| Version | 1.4.0 |
| In Bioconductor since | BioC 2.10 (R-2.15) |
| License | GPL-2 |
| Depends | R (>= 2.10.0), igraph0 |
| Imports | |
| Suggests | breastCancerVDX, breastCancerMAINZ, Biobase |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
| Package Source | DART_1.4.0.tar.gz |
| Windows Binary | DART_1.4.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) | DART_1.4.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
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