bam2gr | pre-process bam files |
chromosome | The ping class |
chromosome-method | The ping class |
chromosome-method | The ping class |
chromosome-method | The ping class |
code | Estimation of binding site positions |
code-method | Estimation of binding site positions |
coerce | Estimation of binding site positions |
coerce-method | Estimation of binding site positions |
CoverageTrack | Reads coverage track |
delta | The ping class |
delta-method | The ping class |
delta-method | The ping class |
delta-method | The ping class |
density | Estimation of binding site positions |
density-method | Estimation of binding site positions |
density-method | The ping class |
K | Estimation of binding site positions |
K-method | Estimation of binding site positions |
length | The ping class |
length-method | The ping class |
makeRangedDataOutput | PICS functions. |
maxRange | Estimation of binding site positions |
maxRange-method | Estimation of binding site positions |
minRange | Estimation of binding site positions |
minRange-method | Estimation of binding site positions |
mu | The ping class |
mu-method | The ping class |
mu-method | The ping class |
mu-method | The ping class |
newPing | The ping class |
newPing-method | The ping class |
newPingError | The ping class |
newPingError-method | The ping class |
newPingList | The ping class |
newPingList-method | The ping class |
NucleosomeTrack | Track for the Nucleosome position |
PING | Estimation of binding site positions |
ping | Estimation of binding site positions |
ping-class | Estimation of binding site positions |
pingError | The ping class |
pingError-class | The ping class |
pingList | The ping class |
pingList-class | The ping class |
plot | Estimation of binding site positions |
plot-method | Estimation of binding site positions |
plotSummary | Plot a summary of the prediction for given ranges. |
postPING | Post process Estimation of binding site positions obtained from PING |
RawReadsTrack | Raw reads density track |
score | Estimation of binding site positions |
score-method | The ping class |
score-method | The ping class |
score-method | The ping class |
scoreForward | Estimation of binding site positions |
scoreForward-method | Estimation of binding site positions |
scoreReverse | Estimation of binding site positions |
scoreReverse-method | Estimation of binding site positions |
se | The ping class |
se-method | The ping class |
se-method | The ping class |
se-method | The ping class |
seF | The ping class |
seF-method | The ping class |
seF-method | The ping class |
seF-method | The ping class |
segmentPING | Segment the genome into candidate regions |
segReads | PICS functions. |
segReadsList | PICS functions. |
segReadsListPE | PICS functions. |
segReadsPE | PICS functions. |
seR | The ping class |
seR-method | The ping class |
seR-method | The ping class |
seR-method | The ping class |
setParaEM | PICS functions. |
setParaPrior | PICS functions. |
show | show PING |
show-method | show PING |
show-methods | show PING |
sigmaSqF | Estimation of binding site positions |
sigmaSqF-method | Estimation of binding site positions |
sigmaSqR | Estimation of binding site positions |
sigmaSqR-method | Estimation of binding site positions |
summary | summary PING |
summary-method | summary PING |
summary-methods | summary PING |
w | The ping class |
w-method | The ping class |
w-method | The ping class |
w-method | The ping class |
yeast_chrM | Data sets |
[-method | The ping class |
[[-method | The ping class |