Data used in the vignette of the cnvGSA package

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Documentation for package ‘cnvGSAdata’ version 0.99.2

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cnvGSAdata-package Data used in the examples and vignette of the cnvGSA package
cnv.gvf Rare CNV data from Pinto et al. 2010 ASD study
cnvGSAdata Data used in the examples and vignette of the cnvGSA package
cnvGSA_input_example.RData cnvGSA example input
cnvGSA_output_example.RData cnvGSA example output
gsData.gmt Gene-set data from Pinto et al. 2010 ASD study
input cnvGSA example input
merge_00k_flank_hg18_refGene_jun_2011_exon.gff Gene map for exons in the rare CNV association test of the Pinto et al. 2010 ASD study
merge_00k_flank_hg18_refGene_jun_2011_transcript.gff Gene map for transcripts in the rare CNV association test of the Pinto et al. 2010 ASD study
output cnvGSA example output
s2class.txt Sample-to-class data from Pinto et al. 2010 ASD study