FHCRC Nelson Lab pedbarrayv9 Annotation Data (pedbarrayv9)


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Documentation for package ‘pedbarrayv9.db’ version 2.7.1

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pedbarrayv9 Bioconductor annotation data package
pedbarrayv9.db Bioconductor annotation data package
pedbarrayv9ACCNUM Map Manufacturer identifiers to Accession Numbers
pedbarrayv9ALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
pedbarrayv9CHR Map Manufacturer IDs to Chromosomes
pedbarrayv9CHRLENGTHS A named vector for the length of each of the chromosomes
pedbarrayv9CHRLOC Map Manufacturer IDs to Chromosomal Location
pedbarrayv9CHRLOCEND Map Manufacturer IDs to Chromosomal Location
pedbarrayv9ENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
pedbarrayv9ENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
pedbarrayv9ENTREZID Map between Manufacturer Identifiers and Entrez Gene
pedbarrayv9ENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
pedbarrayv9ENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
pedbarrayv9GENENAME Map between Manufacturer IDs and Genes
pedbarrayv9GO Map between Manufacturer IDs and Gene Ontology (GO)
pedbarrayv9GO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
pedbarrayv9GO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
pedbarrayv9LOCUSID Map between Manufacturer Identifiers and Entrez Gene
pedbarrayv9MAP Map between Manufacturer Identifiers and cytogenetic maps/bands
pedbarrayv9MAPCOUNTS Number of mapped keys for the maps in package pedbarrayv9.db
pedbarrayv9OMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
pedbarrayv9ORGANISM The Organism information for pedbarrayv9
pedbarrayv9ORGPKG The Organism information for pedbarrayv9
pedbarrayv9PATH Mappings between probe identifiers and KEGG pathway identifiers
pedbarrayv9PATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
pedbarrayv9PFAM Map Manufacturer IDs to Pfam IDs
pedbarrayv9PMID Map between Manufacturer Identifiers and PubMed Identifiers
pedbarrayv9PMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
pedbarrayv9PROSITE Map Manufacturer IDs to PROSITE ID
pedbarrayv9REFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
pedbarrayv9SYMBOL Map between Manufacturer Identifiers and Gene Symbols
pedbarrayv9UNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
pedbarrayv9UNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
pedbarrayv9UNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
pedbarrayv9_dbconn Collect information about the package annotation DB
pedbarrayv9_dbfile Collect information about the package annotation DB
pedbarrayv9_dbInfo Collect information about the package annotation DB
pedbarrayv9_dbschema Collect information about the package annotation DB