mosaics

MOSAiCS (MOdel-based one and two Sample Analysis and Inference for ChIP-Seq)

Bioconductor version: 2.10

This package provides functions for fitting MOSAiCS, a statistical framework to analyze one-sample or two-sample ChIP-seq data.

Author: Dongjun Chung, Pei Fen Kuan, Sunduz Keles

Maintainer: Dongjun Chung <chungdon at stat.wisc.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("mosaics")

To cite this package in a publication, start R and enter:

    citation("mosaics")

biocViews	Bioinformatics, ChIPseq, Genetics, Sequencing, Software, Transcription
Depends	R (>= 2.11.1), methods, graphics, Rcpp
Imports	MASS, splines, lattice, IRanges
Suggests	mosaicsExample
System Requirements	Perl
License	GPL (>= 2)
URL	http://groups.google.com/group/mosaics_user_group
Depends On Me
Imports Me
Suggests Me
Version	1.4.1
Since	Bioconductor 2.8 (R-2.13)

Common Bioconductor workflows include:

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!