addDNACopy | Methods for Function addDNACopy in Package 'CNAnorm' |
addDNACopy-method | Methods for Function addDNACopy in Package 'CNAnorm' |
addDNACopy-methods | Methods for Function addDNACopy in Package 'CNAnorm' |
addSmooth | Methods for Function addSmooth in Package 'CNAnorm' |
addSmooth-method | Methods for Function addSmooth in Package 'CNAnorm' |
addSmooth-methods | Methods for Function addSmooth in Package 'CNAnorm' |
chrs | Accessors methods for Function ratio in Package 'CNAnorm' |
chrs-method | Class "CNAnorm" |
chrs-methods | Accessors methods for Function ratio in Package 'CNAnorm' |
chrs<- | Accessors methods for Function ratio in Package 'CNAnorm' |
chrs<--method | Class "CNAnorm" |
chrs<--methods | Accessors methods for Function ratio in Package 'CNAnorm' |
CN | A CNAnorm object with information about most abundant ploidy states, obtained from data LS041. |
CNAnorm | Class "CNAnorm" |
CNAnorm-class | Class "CNAnorm" |
dataFrame2object | Convert a data frame into an object of Class '"CNAnorm"' |
DerivData-class | Class "DerivData" |
discreteNorm | Methods for Function addSmooth in Package 'CNAnorm' |
discreteNorm-method | Methods for Function addSmooth in Package 'CNAnorm' |
discreteNorm-methods | Methods for Function addSmooth in Package 'CNAnorm' |
exportTable | Methods for Function exportTable in Package 'CNAnorm' |
exportTable-method | Methods for Function exportTable in Package 'CNAnorm' |
exportTable-methods | Methods for Function exportTable in Package 'CNAnorm' |
gcNorm | Methods for Function gcNorm in Package 'CNAnorm' |
gcNorm-method | Methods for Function gcNorm in Package 'CNAnorm' |
gcNorm-methods | Methods for Function gcNorm in Package 'CNAnorm' |
InData-class | Class "InData" ~~~ |
length-method | Class "CNAnorm" |
length-method | Class "DerivData" |
length-method | Class "InData" ~~~ |
LS041 | Mapped reads in tumor and matched blood for patient LS041 |
Params-class | Class "Params" |
peakPloidy | Methods for Function peakPloidy in Package 'CNAnorm' |
peakPloidy-method | Methods for Function peakPloidy in Package 'CNAnorm' |
peakPloidy-methods | Methods for Function peakPloidy in Package 'CNAnorm' |
plotGenome | Methods for Function plotGenome in Package 'CNAnorm' |
plotGenome-method | Methods for Function plotGenome in Package 'CNAnorm' |
plotGenome-methods | Methods for Function plotGenome in Package 'CNAnorm' |
plotPeaks | Methods for Function plotPeaks in Package 'CNAnorm' |
plotPeaks-method | Methods for Function plotPeaks in Package 'CNAnorm' |
plotPeaks-methods | Methods for Function plotPeaks in Package 'CNAnorm' |
pos | Accessors methods for Function ratio in Package 'CNAnorm' |
pos-method | Class "CNAnorm" |
pos-methods | Accessors methods for Function ratio in Package 'CNAnorm' |
pos<- | Accessors methods for Function ratio in Package 'CNAnorm' |
pos<--method | Class "CNAnorm" |
pos<--methods | Accessors methods for Function ratio in Package 'CNAnorm' |
ratio | Methods for Function ratio in Package 'CNAnorm' |
ratio-method | Class "CNAnorm" |
ratio-methods | Methods for Function ratio in Package 'CNAnorm' |
ratio.n | Methods for Function ratio in Package 'CNAnorm' |
ratio.n-method | Class "CNAnorm" |
ratio.n-methods | Methods for Function ratio in Package 'CNAnorm' |
ratio.s | Methods for Function ratio in Package 'CNAnorm' |
ratio.s-method | Class "CNAnorm" |
ratio.s-methods | Methods for Function ratio in Package 'CNAnorm' |
ratio.s.n | Methods for Function ratio in Package 'CNAnorm' |
ratio.s.n-method | Class "CNAnorm" |
ratio.s.n-methods | Methods for Function ratio in Package 'CNAnorm' |
segMean | Methods for Function ratio in Package 'CNAnorm' |
segMean-method | Class "CNAnorm" |
segMean-methods | Methods for Function ratio in Package 'CNAnorm' |
segMean.n | Methods for Function ratio in Package 'CNAnorm' |
segMean.n-method | Class "CNAnorm" |
segMean.n-methods | Methods for Function ratio in Package 'CNAnorm' |
sugg.peaks | Methods for Function to retrieve suggested/validated ploidy and peaks in Package 'CNAnorm' |
sugg.peaks-method | Class "CNAnorm" |
sugg.peaks-methods | Methods for Function to retrieve suggested/validated ploidy and peaks in Package 'CNAnorm' |
sugg.ploidy | Methods for Function to retrieve suggested/validated ploidy and peaks in Package 'CNAnorm' |
sugg.ploidy-method | Class "CNAnorm" |
sugg.ploidy-methods | Methods for Function to retrieve suggested/validated ploidy and peaks in Package 'CNAnorm' |
valid.peaks | Methods for Function to retrieve suggested/validated ploidy and peaks in Package 'CNAnorm' |
valid.peaks-method | Class "CNAnorm" |
valid.peaks-methods | Methods for Function to retrieve suggested/validated ploidy and peaks in Package 'CNAnorm' |
valid.ploidy | Methods for Function to retrieve suggested/validated ploidy and peaks in Package 'CNAnorm' |
valid.ploidy-method | Class "CNAnorm" |
valid.ploidy-methods | Methods for Function to retrieve suggested/validated ploidy and peaks in Package 'CNAnorm' |
validation | Methods for Function addSmooth in Package 'CNAnorm' |
validation-method | Methods for Function addSmooth in Package 'CNAnorm' |
validation-methods | Methods for Function addSmooth in Package 'CNAnorm' |
[-method | Class "CNAnorm" |