Calling aberrations for array CGH tumor profiles.


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Documentation for package ‘CGHcall’ version 2.16.0

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CGHcall-package Calling aberrations for array CGH tumor profiles.
CGHcall Calling aberrations for array CGH tumor profiles.
ExpandCGHcall Expands result fron CGHcall to CGHcall object.
make_cghRaw Convert a dataframe or textfile to an object of class cghRaw.
normalize Normalization and cellularity adjustment for arrayCGH data.
postsegnormalize Post-segmentation normalization
preprocess Preprocess arrayCGH data
segmentData Breakpoint detection for arrayCGH data.
Wilting Cervical cancer arrayCGH data