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| Biostrings::Biostrings2Classes | A short presentation of the basic classes defined in Biostrings 2 | source | R code | ||
| Biostrings::MultipleAlignments | Multiple Alignments | source | R code | ||
| Biostrings::PairwiseAlignments | Pairwise Sequence Alignments | source | R code | ||
| Biostrings::matchprobes | Handling probe sequence information | source | R code |