| Package | Maintainer | Title |
|---|---|---|
| annaffy | Colin A. Smith | Annotation tools for Affymetrix biological metadata |
| annotate | Biocore Team c/o BioC user list | Annotation for microarrays |
| Category | Robert Gentleman | Category Analysis |
| globaltest | Jelle Goeman | Testing Association of Groups of Genes with a Clinical Variable |
| GOstats | Robert Gentleman | Tools for manipulating GO and microarrays. |
| goTools | Agnes Paquet | Functions for Gene Ontology database |
| SemSim | Xiang Guo | Gene Ontology-based Semantic Similarity Measures |